illumina
Here are 176 public repositories matching this topic...
Script to unzip, clean, assemble, and convert illumina pair-end fastq files in all subdirectories for 16S amplicon data (V3, V4 and V3-V4 regions).
-
Updated
Dec 13, 2018
Automated mitochondrial genome assembly using SRA public data
-
Updated
Dec 29, 2023 - Perl
Inputs a QIIME microbiome file. outputs it into a file similar to that used in BaseSpace
-
Updated
Dec 5, 2016 - Python
Find shared SNPs between different microarray chips
-
Updated
Mar 27, 2018 - Shell
-
Updated
Jan 18, 2020 - Python
TFM_AliciaAranda_QApckg
-
Updated
May 31, 2022 - R
A repository containing general scripts that are useful within bioinformatics
-
Updated
Mar 2, 2017 - Shell
A simple program to generate .vcf and plink format files from .idat files
-
Updated
Apr 18, 2024 - Shell
bash scripts used in the analysis of Illumina sequence data
-
Updated
Jun 13, 2019 - Shell
generates reference matrix of average beta methylation values
-
Updated
Jan 30, 2018 - Python
Analysis documentation for research into the variants associated with hyperparathyroidism. Illumina, germline, human, whole exome sequence (WES) data from the CCDHB.
-
Updated
Mar 2, 2023 - Shell
Synthetically Engineered Wastewater sequence data for Assessing Genomic Entities
-
Updated
Feb 26, 2024 - Python
A pipeline to map and visualize in vitro acquired CRIPSR spacers from Illumina sequence data. McKitterick, A. C.; LeGault, K. N.; Angermeyer, A.; Alam, M.; Seed, K. D. Competition between mobile genetic elements drives optimization of a phage-encoded CRISPR-Cas system: insights from a natural arms race. Phil. Trans. R. Soc. B 2019, 374, 20180089…
-
Updated
Sep 13, 2018 - Python
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
-
Updated
Jun 24, 2023 - Scala
Improve this page
Add a description, image, and links to the illumina topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the illumina topic, visit your repo's landing page and select "manage topics."