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core dumped phytime on my dataset #134

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Jigyasa3 opened this issue Oct 6, 2020 · 0 comments
Open

core dumped phytime on my dataset #134

Jigyasa3 opened this issue Oct 6, 2020 · 0 comments

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@Jigyasa3
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Jigyasa3 commented Oct 6, 2020

Hey all!

I am using the default settings of phytime on my dataset. My dataset is in the same format as the example dataset, but phytime is not running at all.

code-
phytime --xml=cog0525_dating.xml

error-
malloc(): corrupted top size
Aborted (core dumped)

I am running the command on a computing cluster using 150G memory on a single AMD node.

The file "cog0525_dating.xml" and the nexus file "protein_nucleotide_cockroach-extracted-Treponema-COG0525.txt" are available here-
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@Jigyasa3