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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

Pinned

  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 330 148

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 21 13

Repositories

Showing 10 of 369 repositories
  • ACE Public

    R Shiny app for comparison of annotations (e.g., cell type assignments)

    R 1 1 11 0 Updated Jun 11, 2024
  • mtrain_regimens Public

    Repository to track training stages and regimens for visual behavior

    Python 2 4 14 0 Updated Jun 11, 2024
  • npc_lims Public

    Tools to fetch and update paths, metadata and state for Mindscope Neuropixels sessions, in the cloud.

    Python 0 MIT 0 6 0 Updated Jun 11, 2024
  • np_codeocean Public

    Tools for uploading and interacting with Mindscope Neuropixels experiments on Code Ocean

    Python 0 2 1 0 Updated Jun 11, 2024
  • cell_type_mapper Public

    Repository for storing prototype functionality implementations for the BKP

    Python 9 2 4 1 Updated Jun 11, 2024
  • aics-fms-file-explorer-app Public

    AICS FMS File Explorer Front End

    TypeScript 2 BSD-3-Clause 1 26 4 Updated Jun 11, 2024
  • pigeon Public

    A STOMP client with message definitions via Pydantic

    Python 0 BSD-3-Clause 0 0 1 Updated Jun 11, 2024
  • npc_session Public

    Basic tools for parsing subject, session, date and time associated with data from the Mindscope Neuropixels team, in the cloud.

    Python 0 0 0 0 Updated Jun 11, 2024
  • npc_shields Public

    Tools for Neuropixels probe insertion into SHIELD implants: providing suggested targets, recording actual insertions, storing notes.

    Python 0 0 0 0 Updated Jun 11, 2024
  • ephys-analysis-tools Public

    Code base generating formatted data tables that streamlines data analysis process for ephys production metadata.

    Python 0 0 0 0 Updated Jun 11, 2024

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