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19 Open 79 Closed
19 Open 79 Closed
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Issues list

[External] [Feature] Clarify Conda Requirement enhancement New feature or request
#199 opened May 3, 2024 by garfinjm
[Internal] [Feature] Make these custom field validations "smarter" enhancement New feature or request
#198 opened Apr 11, 2024 by jessicarowell
1 task done
@jessicarowell
[Internal] [Feature] Accommodate additional biosample metadata templates starting with wastewater enhancement New feature or request
#189 opened Mar 20, 2024 by kyleoconnell
[Internal] [Feature] Ensure metadata validation is checking all fields required for NCBI submission enhancement New feature or request
#183 opened Mar 12, 2024 by kyleoconnell
[Internal] [Feature] Recode SeqSender to modify data validation enhancement New feature or request
#181 opened Mar 11, 2024 by kyleoconnell
[Internal] [Bug] Won't accept any 'dots' in sample file names bug Something isn't working
#173 opened Feb 28, 2024 by jessicarowell
1 task done
@jessicarowell
[Internal] [Feature] Refactor to support nanopore data enhancement New feature or request
#172 opened Feb 28, 2024 by jessicarowell
1 task done
@jessicarowell
[Internal] [Feature] Check metadata date format enhancement New feature or request
#154 opened Feb 2, 2024 by kyleoconnell
1 task done
[Internal] [Feature] Refactor submission scripts so that each python script from seqsender is a separate local nf process enhancement New feature or request
#147 opened Feb 1, 2024 by kyleoconnell
1 task done
[Internal] [Feature] Migrate to nf-core params validation enhancement New feature or request
#143 opened Jan 31, 2024 by kyleoconnell
1 task done
[Internal] [Feature] Enhance Metadata Validation enhancement New feature or request implement
#138 opened Jan 25, 2024 by ankushkgupta2
1 task done
[Internal] [Test] Test Out Raw Reads (FASTQ) and .GZ Files explore testing
#133 opened Jan 23, 2024 by ankushkgupta2
1 task done
v3.0.0-beta
@ankushkgupta2
[Internal] [Bug] GISAID Submission Error bug Something isn't working
#132 opened Jan 23, 2024 by ankushkgupta2
1 task done
[Internal] [Bug] Add Error Output For No Submission Config Provided bug Something isn't working implement
#124 opened Jan 16, 2024 by ankushkgupta2
1 task done
v3.0.0-beta
@ankushkgupta2
[Internal] [Feature] Allow Nextflow to Handle Parameter Validation enhancement New feature or request question Further information is requested refactor
#99 opened Dec 12, 2023 by kyleoconnell
1 task done
1
[Internal] [Bug] Error with Processing Single Sequence bug Something isn't working
#90 opened Dec 6, 2023 by jtakakuwa
1 task done
@ankushkgupta2
[Internal] [Test] Add Separate CI For Dev Branch implement testing
#89 opened Dec 6, 2023 by ankushkgupta2
1 task done
@ankushkgupta2
1
[Internal] [Feature] Add Expected Bacterial Fields in Metadata enhancement New feature or request explore high-priority
#60 opened Aug 17, 2023 by ankushkgupta2
1 task done
@ankushkgupta2
[Internal] [Feature] Add Singularity to C/I enhancement New feature or request testing
#56 opened Jun 22, 2023 by ankushkgupta2
1 task done
@ankushkgupta2
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