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Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk repository

software.broadinstitute.org/gatk/

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The Genome Analysis Toolkit

See http://www.broadinstitute.org/gatk/

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Official code repository for GATK versions 1.0 through 3.7 (core engine). For GATK 4 code, see the https://github.com/broadinstitute/gatk repository

software.broadinstitute.org/gatk/

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