fix bugs, add new metrics and tasks #169
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v1xerunt
commented
Jun 6, 2023
•
v1xerunt
commented
- fix mismatch between actual output and document descriptions in adacare, concare, agent and stagenet
- add new metrics: outcome-specific mean absolute error, early prediction score from paper "A Comprehensive Benchmark for COVID-19 Predictive Modeling Using Electronic Health Records in Intensive Care"
- add regression related metrics
- add new task: outcome-specific length of stay prediction
- change base_model to support new tasks
1. fix mismatch between actual output and document descriptions in adacare 2. add new metrics: outcome-specific mean absolute error, early prediction score from paper "A Comprehensive Benchmark for COVID-19 Predictive Modeling Using Electronic Health Records in Intensive Care" 3. add regression related metrics 4. add new task: outcome-specific length of stay prediction 5. change base_model to support new tasks
ycq091044
reviewed
Jul 16, 2023
| - a list of list of str for multilabel classification | ||
| label_tokenizer: the label tokenizer. | ||
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| Returns: | ||
| labels: the processed labels. | ||
| """ | ||
| if self.mode in ["binary"]: | ||
| if self.mode in ["binary"] or self.mode in ["early_mortality"]: |
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self.mode in ["binary", "early_mortality"]
ycq091044
reviewed
Jul 16, 2023
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| Args: | ||
| logits: the predicted logit tensor. | ||
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| Returns: | ||
| y_prob: the predicted probability tensor. | ||
| """ | ||
| if self.mode in ["binary"]: | ||
| if self.mode in ["binary"] or self.mode in ["early_mortality"]: |
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