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Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)

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.github/workflows

.github/workflows

 
 

contrib

contrib

 
 

src/pyliger

src/pyliger

 
 

.gitattributes

.gitattributes

 
 

.gitignore

.gitignore

 
 

GO_Enrichment_Analysis.ipynb

GO_Enrichment_Analysis.ipynb

 
 

LICENSE

LICENSE

 
 

README.md

README.md

 
 

integrating_multi_scRNA_data.ipynb

integrating_multi_scRNA_data.ipynb

 
 

online_iNMF_tutorial.ipynb

online_iNMF_tutorial.ipynb

 
 

pdm.lock

pdm.lock

 
 

pyproject.toml

pyproject.toml

 
 

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pyliger: Scalable single-cell multi-omic integration in python

Installation instructions: pip install pyliger

Jupyter notebooks with step-by-step tutorials demonstrating how to use pyliger are included.

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Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)

Topics

python single-cell non-negative-matrix-factorization multi-omic-integration

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License

GPL-3.0 license
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v0.2.2: NumPy 2.0 dependency hotfix Latest
Apr 9, 2024
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