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Nextstrain build for novel coronavirus SARS-CoV-2
Python 1.4k 405
Pipeline components for real-time phylodynamic analysis
Python 265 128
Web app for visualizing pathogen evolution
JavaScript 289 160
The Nextstrain website
Nextstrain build for avian influenza viruses
Nextstrain build for mpox virus
Datasets for https://github.com/nextstrain/nextclade
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
Nextstrain build for measles virus