Popular repositories
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snakemake-wrappers
snakemake-wrappers PublicThis is the development home of the Snakemake wrapper repository, see
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snakemake-github-action
snakemake-github-action PublicA Github action for running a Snakemake workflow
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snakemake-workflow-catalog
snakemake-workflow-catalog PublicA statically generated catalog of available Snakemake workflows
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snakedeploy
snakedeploy Publicdeploy a snakemake pipeline directly from version control (under development)
Repositories
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- snakemake-executor-plugin-slurm Public
A Snakemake executor plugin for submitting jobs to a SLURM cluster
- snakemake-executor-plugin-kubernetes Public
A snakemake executor plugin for submission of jobs to Kubernetes
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- snakemake-storage-plugin-s3 Public
A Snakemake storage plugin for S3 API storage (AWS S3, MinIO, etc.)
- snakemake-plugin-catalog Public
An automatically updated catalog of Snakemake plugins and their documentation
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