An analysis and visualization platform for 'omics data
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Updated
Jun 12, 2024 - Python
An analysis and visualization platform for 'omics data
tairaccession python package for interaction with tair and analyzing arabidopsis genome.
Build a partitioned pangenome graph from microbial genomes
Python library to facilitate genome assembly, annotation, and comparative genomics
zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)
The Ensembl Compara Perl API and SQL schema
A Scalable GPU-Based Whole Genome Aligner, published in SC20: https://doi.ieeecomputersociety.org/10.1109/SC41405.2020.00043
A GLUE project for comparative genomic analysis of circular Rep-encoding single-stranded DNA (CRESS DNA) viruses
a versatile toolkit for processing and analyzing diverse types of sequence data
A toolkit for prokaryotic comparative genomics
R package for the statistical detection of orthogroups associated to plant traits pointing to specific genes that might be present of absence and are good candidate genes responsible for the plant trait.
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
HyPhy: Hypothesis testing using Phylogenies
A GLUE project for hepadnaviruses (family Hepadnaviridae)
Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.
Molecular Evolution Library for Python
A GLUE project for comparative genomic analysis of flaviviruses
A GLUE project for comparative genomic analysis of parvoviruses
Topological data analysis for Comparative Genomics
A genome visualization python package for comparative genomics
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