Toolbox for molecular animations in Blender, powered by Geometry Nodes.
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Updated
Jun 9, 2024 - Python
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
pyMBE provides tools to facilitate building up molecules with complex architectures in the Molecular Dynamics software ESPResSo. For an up-to-date API documention please check our website:
A Python package for extracting and simulating diffuse scattering of X-rays in protein crystals
A Python package to manage protein design workflows on computing clusters and local machines. Documentation can be found here: https://protflow.readthedocs.io/en/latest/
A Python package to calculate, visualize and analyze correlation maps of proteins.
Set of tools to generate a multi-eGO force field to perform molecular dynamics simulations
Geom3D: Geometric Modeling on 3D Structures, NeurIPS 2023
MoleculeKit: Your favorite molecule manipulation kit
Plots from papers by Jeffrey M. Dick
Official repository for discrete Walk-Jump Sampling (dWJS)
FAS - Tool for Feature Architecture Similarity calculation
R client for the OmniPath web service
A website to store, visualize, and analyze OSU Venom Biochem Lab proteins
Mutual Information Tools for protein Sequence analysis in Julia
Contextualizing protein representations using deep learning on protein networks and single-cell data
KIF - Key Interactions Finder. A python package to identify the key molecular interactions that regulate any conformational change.
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