Pinned

1. welch-lab/liger welch-lab/liger Public

   R package for integrating and analyzing multiple single-cell datasets

   R 365 78

2. welch-lab/MultiVelo welch-lab/MultiVelo Public

   Multi-omic velocity inference

   Python 98 12

3. welch-lab/VeloVAE welch-lab/VeloVAE Public

   Deep Generative Modeling of RNA Velocity

   Jupyter Notebook 28 4

4. welch-lab/pyliger welch-lab/pyliger Public

   Python package for integrating and analyzing multiple single-cell datasets (A Python version of LIGER)

   Jupyter Notebook 25 5

5. welch-lab/PerturbNet welch-lab/PerturbNet Public

   PerturbNet is a deep generative model that can predict the distribution of cell states induced by chemical or genetic perturbation

   Python 25 10